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1.
Acta Microbiol Immunol Hung ; 70(4): 318-324, 2023 Dec 07.
Article in English | MEDLINE | ID: mdl-37938220

ABSTRACT

Haemophilus influenzae is one of the main bacteria responsible for otitis media (OM) among children worldwide. We aimed to estimate the distribution of encapsulated and non-capsulated variants (NTHi), biotypes, antibiotic susceptibility, and molecular epidemiology of H. influenzae isolates recovered from pediatric OM cases in Bulgaria.Capsule detection was done by PCR for bexB gene, absent in NTHi. All encapsulated strains were subjected to PCR serotyping. MIC susceptibility testing was performed according to the criteria of EUCAST. MLST was conducted for all 71 OM isolates.The capsule detection and PCR - serotyping disclosed a predominance of NTHi (90.1%) and a few "a", "f", and "c" types. Biotype I was the most widespread (42.3%). ß-lactam resistance was found in 35.2% of the isolates. MLST represented heterogenic population structure, whereas the most represented clonal complexes belonged to ST-3, ST-57, ST-105, and ST-1426. 42.3% of the STs showed relatedness to globally represented clones, and 11.3% displayed affiliation to international type 2.Most of the H. influenzae isolates recovered from children with otitis media were non-typable strains from biotype I. The examined population structure was genetically diverse, with a predominance of international type 2 isolates.


Subject(s)
Haemophilus Infections , Otitis Media , Child , Humans , Haemophilus influenzae/genetics , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Haemophilus Infections/epidemiology , Haemophilus Infections/genetics , Haemophilus Infections/microbiology , Multilocus Sequence Typing , Molecular Epidemiology , Bulgaria/epidemiology , Drug Resistance, Bacterial , Otitis Media/epidemiology , Otitis Media/drug therapy , Otitis Media/microbiology , Microbial Sensitivity Tests
2.
Arch Microbiol ; 205(1): 27, 2022 Dec 15.
Article in English | MEDLINE | ID: mdl-36520253

ABSTRACT

Haemophilus influenzae is a causative agent of serious infections, especially among children. ß-lactam antibiotics are commonly used for the treatment of these infections. Among H. influenzae isolates, ß-lactam resistance is due to the presence of ß-lactamase, or to mutations in the ftsI gene that generate altered PBP3 (penicillin-binding protein 3) with reduced affinity for ß-lactams (BLNAR-ß-lactamase-negative, ampicillin-resistant). Wild-type ftsI gene encoding for PBP3 was amplified in whole from ß-lactam susceptible H. influenzae Rd and cloned in pLS88 plasmid to obtain pADUTAS17, which was then used to transform known BLNAR strains, susceptible strains, and a strain (CF55) with wild-type ftsI but unexplained reduced ß-lactam susceptibility. Ampicillin and cefotaxime MICs (minimum inhibitory concentration) were determined after transformation with pLS88 and pADUTAS17 plasmids. The results showed that antibiotic susceptibilities were not affected by trans-complementation for isolates carrying wild-type ftsI gene. However, trans-complementation for all BLNAR strains showed decreases between - 0.957 and 0.5-fold for ampicillin and cefotaxime, confirming the role of the PBP3 substitutions in the BLNAR phenotype of these isolates. The first article showed that trans-complementation might be a useful tool in the investigation of decreased ß-lactam susceptibility in H. influenzae.


Subject(s)
Ampicillin Resistance , Haemophilus Infections , Haemophilus influenzae , Humans , Ampicillin/pharmacology , Ampicillin Resistance/genetics , Anti-Bacterial Agents/pharmacology , beta-Lactamases/genetics , beta-Lactamases/metabolism , beta-Lactams/pharmacology , Cefotaxime/pharmacology , Haemophilus Infections/genetics , Haemophilus influenzae/genetics , Microbial Sensitivity Tests , Mutation
3.
J Vet Sci ; 23(1): e2, 2022 Jan.
Article in English | MEDLINE | ID: mdl-34931503

ABSTRACT

BACKGROUND: Co-infections of the porcine reproductive and respiratory syndrome virus (PRRSV) and the Haemophilus parasuis (HPS) are severe in Chinese pigs, but the immune response genes against co-infected with 2 pathogens in the lungs have not been reported. OBJECTIVES: To understand the effect of PRRSV and/or HPS infection on the genes expression associated with lung immune function. METHODS: The expression of the immune-related genes was analyzed using RNA-sequencing and bioinformatics. Differentially expressed genes (DEGs) were detected and identified by quantitative real-time polymerase chain reaction (qRT-PCR), immunohistochemistry (IHC) and western blotting assays. RESULTS: All experimental pigs showed clinical symptoms and lung lesions. RNA-seq analysis showed that 922 DEGs in co-challenged pigs were more than in the HPS group (709 DEGs) and the PRRSV group (676 DEGs). Eleven DEGs validated by qRT-PCR were consistent with the RNA sequencing results. Eleven common Kyoto Encyclopedia of Genes and Genomes pathways related to infection and immune were found in single-infected and co-challenged pigs, including autophagy, cytokine-cytokine receptor interaction, and antigen processing and presentation, involving different DEGs. A model of immune response to infection with PRRSV and HPS was predicted among the DEGs in the co-challenged pigs. Dual oxidase 1 (DUOX1) and interleukin-21 (IL21) were detected by IHC and western blot and showed significant differences between the co-challenged pigs and the controls. CONCLUSIONS: These findings elucidated the transcriptome changes in the lungs after PRRSV and/or HPS infections, providing ideas for further study to inhibit ROS production and promote pulmonary fibrosis caused by co-challenging with PRRSV and HPS.


Subject(s)
Haemophilus Infections , Porcine Reproductive and Respiratory Syndrome , Animals , Coinfection/veterinary , Gene Expression Profiling/veterinary , Haemophilus Infections/genetics , Haemophilus Infections/immunology , Haemophilus Infections/veterinary , Haemophilus parasuis , Immunity , Lung/microbiology , Lung/virology , Porcine Reproductive and Respiratory Syndrome/genetics , Porcine Reproductive and Respiratory Syndrome/immunology , Porcine respiratory and reproductive syndrome virus , Swine
4.
mBio ; 12(1)2021 01 19.
Article in English | MEDLINE | ID: mdl-33468699

ABSTRACT

Surface expression of the common vertebrate sialic acid (Sia) N-acetylneuraminic acid (Neu5Ac) by commensal and pathogenic microbes appears structurally to represent "molecular mimicry" of host sialoglycans, facilitating multiple mechanisms of host immune evasion. In contrast, ketodeoxynonulosonic acid (Kdn) is a more ancestral Sia also present in prokaryotic glycoconjugates that are structurally quite distinct from vertebrate sialoglycans. We detected human antibodies against Kdn-terminated glycans, and sialoglycan microarray studies found these anti-Kdn antibodies to be directed against Kdn-sialoglycans structurally similar to those on human cell surface Neu5Ac-sialoglycans. Anti-Kdn-glycan antibodies appear during infancy in a pattern similar to those generated following incorporation of the nonhuman Sia N-glycolylneuraminic acid (Neu5Gc) onto the surface of nontypeable Haemophilus influenzae (NTHi), a human commensal and opportunistic pathogen. NTHi grown in the presence of free Kdn took up and incorporated the Sia into its lipooligosaccharide (LOS). Surface display of the Kdn within NTHi LOS blunted several virulence attributes of the pathogen, including Neu5Ac-mediated resistance to complement and whole blood killing, complement C3 deposition, IgM binding, and engagement of Siglec-9. Upper airway administration of Kdn reduced NTHi infection in human-like Cmah null (Neu5Gc-deficient) mice that express a Neu5Ac-rich sialome. We propose a mechanism for the induction of anti-Kdn antibodies in humans, suggesting that Kdn could be a natural and/or therapeutic "Trojan horse" that impairs colonization and virulence phenotypes of free Neu5Ac-assimilating human pathogens.IMPORTANCE All cells in vertebrates are coated with a dense array of glycans often capped with sugars called sialic acids. Sialic acids have many functions, including serving as a signal for recognition of "self" cells by the immune system, thereby guiding an appropriate immune response against foreign "nonself" and/or damaged cells. Several pathogenic bacteria have evolved mechanisms to cloak themselves with sialic acids and evade immune responses. Here we explore a type of sialic acid called "Kdn" (ketodeoxynonulosonic acid) that has not received much attention in the past and compare and contrast how it interacts with the immune system. Our results show potential for the use of Kdn as a natural intervention against pathogenic bacteria that take up and coat themselves with external sialic acid from the environment.


Subject(s)
Antigens, CD/immunology , Haemophilus Infections/immunology , Haemophilus influenzae/immunology , Host-Pathogen Interactions/immunology , N-Acetylneuraminic Acid/chemistry , Sialic Acid Binding Immunoglobulin-like Lectins/immunology , Sialic Acids/immunology , Animals , Antibodies/chemistry , Antibodies/metabolism , Antigens, CD/metabolism , Biological Transport , Complement C3/immunology , Complement C3/metabolism , Female , Glycoconjugates/chemistry , Glycoconjugates/immunology , Haemophilus Infections/genetics , Haemophilus Infections/microbiology , Haemophilus influenzae/chemistry , Host-Pathogen Interactions/genetics , Humans , Immunoglobulin M/immunology , Immunoglobulin M/metabolism , Mice , Mice, Inbred C57BL , Molecular Mimicry/genetics , Molecular Mimicry/immunology , N-Acetylneuraminic Acid/immunology , Protein Binding , Sialic Acid Binding Immunoglobulin-like Lectins/metabolism , Sialic Acids/chemistry , Sugar Acids/chemistry , Sugar Acids/immunology
5.
Genes (Basel) ; 11(9)2020 09 21.
Article in English | MEDLINE | ID: mdl-32967147

ABSTRACT

Bacterial meningitis (BM) is a severe disease caused by various bacterial pathogens. Toll-like receptors (TLRs) protect humans from invading pathogens. In this study, we determined whether single nucleotide polymorphisms (SNPs) of TLR4 and TLR9 are associated with susceptibility to and outcome of BM in Angolan children. Samples were taken from 241 patients and 265 age-matched ethnic controls. The SNPs TLR4 rs4986790 (896A > G) and TLR9 rs187084 (-1486T > C) were determined by high-resolution melting analysis (HRMA). The frequency of variant genotypes in TLR4 was significantly higher in patients with Haemophilus influenzae meningitis than controls (odds ratio (OR), 2.5; 95% confidence interval (CI), 1.2-5.4; p = 0.021), whereas the frequency of variant genotypes in TLR9 was significantly lower in patients with H. influenzae meningitis than controls (OR, 0.4; 95% CI, 0.2-0.9; p = 0.036). No such differences were found with other causative pathogens, such as Streptococcus pneumoniae and Neisseria meningitidis. At the time of discharge, patients with meningitis caused by Gram-negative bacteria who were carriers of variant TLR4 genotypes had a higher risk of ataxia (OR, 12.91; 95% CI, 1.52-109.80; p = 0.019) and other neurological sequelae (OR, 11.85; 95% CI, 1.07-131.49; p = 0.044) than those with the wild-type TLR4 genotype. Our study suggests an association between H. influenzae meningitis and genetic variation between TLR4 and TLR9 in Angolan children.


Subject(s)
Genetic Predisposition to Disease/genetics , Haemophilus Infections/genetics , Haemophilus influenzae/pathogenicity , Meningitis, Haemophilus/genetics , Polymorphism, Single Nucleotide/genetics , Toll-Like Receptor 4/genetics , Toll-Like Receptor 9/genetics , Adolescent , Child , Child, Preschool , Female , Gene Frequency/genetics , Genotype , Humans , Infant , Infant, Newborn , Male , Neisseria meningitidis/pathogenicity , Streptococcus pneumoniae/pathogenicity
6.
Genes (Basel) ; 11(7)2020 07 08.
Article in English | MEDLINE | ID: mdl-32650475

ABSTRACT

We aimed to explore the role of TLR4 (rs4986790) polymorphism in the nasopharyngeal (NP) bacterial colonization and its consequent impact on the development of childhood asthma. A semi-quantitative culture of NP swabs was performed on 473 children at 2 months of age and on 213 children at 13 months of age. TLR4 polymorphism was analyzed for 396 children. Children were followed from birth to the age of 7.5 years and the final outcome was physician-diagnosed asthma. The associations between TLR4 genotype, bacterial colonization, and asthma were analyzed. Children with TLR4 AG or GG genotype were more often colonized with Moraxella catarrhalis at 2 months of age (p = 0.009) and Haemophilus influenzae at 13 months of age (p = 0.018). Children who were colonized with H. influenzae at 13 months of age had a significantly higher risk of later development of asthma (p = 0.004). M. catarrhalis or H. Influenzae colonization at 2 months of age or TLR4 genotype Asp299Gly were not associated with the development of childhood asthma. TLR4 Asp299Gly polymorphism was associated with an increased risk of colonization of M. catarrhalis and H. influenzae in children. The colonization with H. influenzae at 13 months of age was associated with a higher risk of later development of childhood asthma.


Subject(s)
Asthma/genetics , Haemophilus Infections/genetics , Moraxellaceae Infections/genetics , Polymorphism, Single Nucleotide , Toll-Like Receptor 4/genetics , Asthma/epidemiology , Asthma/pathology , Child , Child, Preschool , Female , Haemophilus Infections/epidemiology , Haemophilus Infections/pathology , Haemophilus influenzae/pathogenicity , Humans , Infant , Male , Microbiota , Moraxella catarrhalis/pathogenicity , Moraxellaceae Infections/epidemiology , Moraxellaceae Infections/pathology , Nasal Cavity/microbiology , Pharynx/microbiology
8.
Front Immunol ; 10: 1721, 2019.
Article in English | MEDLINE | ID: mdl-31417543

ABSTRACT

Non-typeable Haemophilus influenzae (NTHi) is a frequent cause of lower respiratory tract infection in people with chronic obstructive pulmonary disease (COPD). Pellino proteins are a family of E3 ubiquitin ligases that are critical regulators of TLR signaling and inflammation. The aim of this study was to identify a role for Pellino-1 in airway defense against NTHi in the context of COPD. Pellino-1 is rapidly upregulated by LPS and NTHi in monocyte-derived macrophages (MDMs) isolated from individuals with COPD and healthy control subjects, in a TLR4 dependent manner. C57BL/6 Peli1-/- and wild-type (WT) mice were subjected to acute (single LPS challenge) or chronic (repeated LPS and elastase challenge) airway inflammation followed by NTHi infection. Both WT and Peli1-/- mice develop airway inflammation in acute and chronic airway inflammation models. Peli1-/- animals recruit significantly more neutrophils to the airway following NTHi infection which is associated with an increase in the neutrophil chemokine, KC, in bronchoalveolar lavage fluid as well as enhanced clearance of NTHi from the lung. These data suggest that therapeutic inhibition of Pellino-1 may augment immune responses in the airway and enhance bacterial clearance in individuals with COPD.


Subject(s)
Haemophilus Infections/immunology , Haemophilus influenzae/immunology , Macrophages/immunology , Monocytes/immunology , Nuclear Proteins/immunology , Pneumonia, Bacterial/immunology , Ubiquitin-Protein Ligases/immunology , Animals , Chemokine CXCL1/genetics , Chemokine CXCL1/immunology , Haemophilus Infections/genetics , Haemophilus Infections/pathology , Humans , Macrophages/pathology , Mice , Mice, Knockout , Monocytes/pathology , Nuclear Proteins/genetics , Pneumonia, Bacterial/genetics , Pneumonia, Bacterial/pathology , Pulmonary Disease, Chronic Obstructive/genetics , Pulmonary Disease, Chronic Obstructive/immunology , Pulmonary Disease, Chronic Obstructive/pathology , Ubiquitin-Protein Ligases/genetics
9.
PLoS One ; 14(8): e0221133, 2019.
Article in English | MEDLINE | ID: mdl-31415656

ABSTRACT

BACKGROUND: Antimicrobial resistance (AMR) rates may display seasonal variation. However, it is not clear whether this seasonality is influenced by the seasonal variation of infectious diseases, geographical region or differences in antibiotic prescription patterns. Therefore, we assessed the seasonality of AMR rates in respiratory bacteria. METHODS: Seven electronic databases (Embase.com, Medline Ovid, Cochrane CENTRAL, Web of Science, Core Collection, Biosis Ovid, and Google Scholar), were searched for relevant studies from inception to Jun 25th, 2019. Studies describing resistance rates of Streptococcus pneumoniae and Haemophilus influenzae were included in this review. By using random-effects meta-analysis, pooled odd ratios of seasonal AMR rates were calculated using winter as the reference group. Pooled odd ratios were obtained by antibiotic class and geographical region. RESULTS: We included 13 studies, of which 7 were meta-analyzed. Few studies were done in H. influenzae, thus this was not quantitively analyzed. AMR rates of S. pneumoniae to penicillins were lower in other seasons than in winter with pooled OR = 0.71; 95% CI = 0.65-0.77; I2 = 0.0%, and to all antibiotics with pooled OR = 0.68; 95% CI = 0.60-0.76; I2 = 14.4%. Irrespective of geographical region, the seasonality of AMR rates in S. pneumoniae remained the same. CONCLUSION: The seasonality of AMR rates could result from the seasonality of infectious diseases and its accompanied antibiotic use.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Drug Resistance, Bacterial , Haemophilus Infections , Haemophilus influenzae , Pneumonia, Pneumococcal , Seasons , Streptococcus pneumoniae , Drug Resistance, Bacterial/drug effects , Drug Resistance, Bacterial/genetics , Haemophilus Infections/genetics , Haemophilus Infections/metabolism , Haemophilus Infections/pathology , Haemophilus influenzae/genetics , Haemophilus influenzae/metabolism , Humans , Pneumonia, Pneumococcal/drug therapy , Pneumonia, Pneumococcal/genetics , Pneumonia, Pneumococcal/metabolism , Respiratory System/microbiology , Streptococcus pneumoniae/genetics , Streptococcus pneumoniae/metabolism
10.
Mol Genet Genomic Med ; 7(8): e838, 2019 08.
Article in English | MEDLINE | ID: mdl-31270959

ABSTRACT

BACKGROUND: Primary ciliary dyskinesia (PCD) is a relatively rare autosomal recessive or X-linked disorder affecting ciliary function. In the set of causative genes, however, predominant pathogenic variants remain unknown in Asia. METHOD: A diagnosis of PCD was made following a modern comprehensive testing including genetic analysis; targeted resequencing for screening variants, and Sanger sequencing for determination of the breakpoints, with an additional review of databases to calculate the deletion frequency. A multiplexed PCR-based detection method has also been developed. RESULTS: We ascertained a 50-year-old Japanese male who had been diagnosed with diffuse panbronchiolitis (DPB), but refractory to macrolide therapy. We reevaluated the case and identified a large homozygous deletion spanning exons 1 to 4 of the DRC1 and determined the breakpoints (NM_145038.4: c.1-3952_540 + 1331del27748-bp). In the PCD cohort at the University of North Carolina, we found a female PCD patient of Korean descent harboring the same homozygous deletion. From the Invitae testing cohort, we extracted four carriers of the same deletion among 965 Asian individuals, whereas no deletion was found in the 23,951 non-Asians. CONCLUSION: We speculate that the DRC1 deletion is a recurrent or perhaps founder mutation in Asians. The simple PCR method could be a useful screening tool.


Subject(s)
Asian/genetics , Bronchiolitis/genetics , Ciliary Motility Disorders/genetics , Genetic Testing/methods , Haemophilus Infections/genetics , Microtubule-Associated Proteins/genetics , Base Sequence/genetics , Bronchiolitis/diagnosis , Child, Preschool , Cohort Studies , DNA Mutational Analysis/methods , Exons/genetics , Feasibility Studies , Female , Founder Effect , Haemophilus Infections/diagnosis , Heterozygote , Homozygote , Humans , Japan/ethnology , Male , Middle Aged , North Carolina , Polymerase Chain Reaction , Republic of Korea/ethnology , Sequence Deletion
11.
Infect Immun ; 87(5)2019 03.
Article in English | MEDLINE | ID: mdl-30833337

ABSTRACT

Nontypeable Haemophilus influenzae (NTHi) is a major human pathogen, responsible for several acute and chronic infections of the respiratory tract. The incidence of invasive infections caused by NTHi is increasing worldwide. NTHi is able to colonize the nasopharynx asymptomatically, and the exact change(s) responsible for transition from benign carriage to overt disease is not understood. We have previously reported that phase variation (the rapid and reversible ON-OFF switching of gene expression) of particular lipooligosaccharide (LOS) glycosyltransferases occurs during transition from colonizing the nasopharynx to invading the middle ear. Variation in the structure of the LOS is dependent on the ON/OFF expression status of each of the glycosyltransferases responsible for LOS biosynthesis. In this study, we surveyed a collection of invasive NTHi isolates for ON/OFF expression status of seven phase-variable LOS glycosyltransferases. We report that the expression state of the LOS biosynthetic genes oafA ON and lic2A OFF shows a correlation with invasive NTHi isolates. We hypothesize that these gene expression changes contribute to the invasive potential of NTHi. OafA expression, which is responsible for the addition of an O-acetyl group onto the LOS, has been shown to impart a phenotype of increased serum resistance and may serve as a marker for invasive NTHi.


Subject(s)
Haemophilus Infections/genetics , Haemophilus Infections/immunology , Haemophilus influenzae/immunology , Haemophilus influenzae/pathogenicity , Host-Pathogen Interactions/immunology , Lipopolysaccharides/biosynthesis , Lipopolysaccharides/genetics , Lipopolysaccharides/immunology , Haemophilus Infections/pathology , Haemophilus influenzae/genetics , Host-Pathogen Interactions/genetics , Humans , Queensland
12.
J Steroid Biochem Mol Biol ; 187: 42-51, 2019 03.
Article in English | MEDLINE | ID: mdl-30399417

ABSTRACT

Chronic obstructive pulmonary disease (COPD), which is characterized by an excessive inflammatory response of the airways, is often complicated by exacerbations. Vitamin D deficiency has been associated with an increased risk for COPD and may predispose COPD patients to a higher exacerbation rate, particularly during smoking. In the current study, we investigated the effect of vitamin D deficiency and cigarette smoke (CS)-exposure on lung inflammation and bacterial clearance after an acute infection with Nontypeable Haemophilus influenzae (NTHi). Vitamin D deficient or sufficient mice were exposed to nose-only CS or ambient air for 6 weeks and oropharyngeally instilled with 106 NTHi. Residual viable NTHi were measured at different time points post-infection. Mechanisms of bacterial clearance (e.g. phagocytosis, pattern recognition receptors, antimicrobial peptides, surfactant proteins and mucin) and lung remodeling (e.g. metalloproteinases, MMP's) were assessed. Although smoking resulted in reduced phagocytosis capacity of macrophages and neutrophils, bacterial clearance was similar to control mice. By contrast and independent of smoking, bacterial clearance was significantly accelerated in vitamin D deficient mice already from 24 h post-infection (p = 0.0087). This faster and complete eradication was associated with a more rapid resolution of cytokines and neutrophils 72 h post-infection and dominated by an upregulation of cathelicidin-related antimicrobial peptide (CRAMP) mRNA during infection (p = 0.026). However, vitamin D deficiency also resulted in more MMP12 protein in broncho-alveolar lavage and a shift in mRNA expression of MMP12/TIMP1 (p = 0.038) and MMP9/TIMP1 (p = 0.024) ratio towards more protease activity. Overall, vitamin D deficient mice resolved NTHi infection faster with a faster resolution of local lung inflammation, possibly through upregulation of CRAMP. This was associated with a disruption of the protease/anti-protease balance, which may potentially scale towards a higher extracellular matrix breakdown.


Subject(s)
Haemophilus Infections/complications , Haemophilus influenzae/isolation & purification , Vitamin D Deficiency/complications , Animals , Cathelicidins/genetics , Cigarette Smoking/adverse effects , Haemophilus Infections/genetics , Haemophilus Infections/immunology , Lung/microbiology , Male , Mice , Mice, Inbred C57BL , Phagocytosis , Up-Regulation , Vitamin D Deficiency/genetics , Vitamin D Deficiency/immunology
13.
PLoS One ; 13(11): e0205700, 2018.
Article in English | MEDLINE | ID: mdl-30383795

ABSTRACT

Haemophilus parasuis is a respiratory pathogen of swine and the etiological agent of Glässer's disease. H. parasuis isolates can exhibit different virulence capabilities ranging from lethal systemic disease to subclinical carriage. To identify genomic differences between phenotypically distinct strains, we obtained the closed whole-genome sequence annotation and genome-wide methylation patterns for the highly virulent Nagasaki strain and for the non-virulent D74 strain. Evaluation of the virulence-associated genes contained within the genomes of D74 and Nagasaki led to the discovery of a large number of toxin-antitoxin (TA) systems within both genomes. Five predicted hemolysins were identified as unique to Nagasaki and seven putative contact-dependent growth inhibition toxin proteins were identified only in strain D74. Assessment of all potential vtaA genes revealed thirteen present in the Nagasaki genome and three in the D74 genome. Subsequent evaluation of the predicted protein structure revealed that none of the D74 VtaA proteins contain a collagen triple helix repeat domain. Additionally, the predicted protein sequence for two D74 VtaA proteins is substantially longer than any predicted Nagasaki VtaA proteins. Fifteen methylation sequence motifs were identified in D74 and fourteen methylation sequence motifs were identified in Nagasaki using SMRT sequencing analysis. Only one of the methylation sequence motifs was observed in both strains indicative of the diversity between D74 and Nagasaki. Subsequent analysis also revealed diversity in the restriction-modification systems harbored by D74 and Nagasaki. The collective information reported in this study will aid in the development of vaccines and intervention strategies to decrease the prevalence and disease burden caused by H. parasuis.


Subject(s)
Haemophilus Infections/genetics , Haemophilus parasuis/genetics , Swine Diseases/genetics , Swine/microbiology , Amino Acid Sequence , Animals , Genome/genetics , Genomics , Haemophilus Infections/microbiology , Haemophilus Infections/veterinary , Haemophilus parasuis/pathogenicity , Swine/genetics , Swine Diseases/microbiology , Virulence/genetics , Virulence Factors/genetics
14.
Sci Rep ; 8(1): 14734, 2018 10 03.
Article in English | MEDLINE | ID: mdl-30282975

ABSTRACT

H. haemolyticus is often misidentified as NTHi due to their close phylogenetic relationship. Differentiating between the two is important for correct identification and appropriate treatment of infective organism and to ensure any role of H. haemolyticus in disease is not being overlooked. Speciation however is not completely reliable by culture and PCR methods due to the loss of haemolysis by H. haemolyticus and the heterogeneity of NTHi. Haemophilus isolates from COPD as part of the AERIS study (ClinicalTrials - NCT01360398) were speciated by analysing sequence data for the presence of molecular markers. Further investigation into the genomic relationship was carried out using average nucleotide identity and phylogeny of allelic and genome alignments. Only 6.3% were identified as H. haemolyticus. Multiple in silico methods were able to distinguish H. haemolyticus from NTHi. However, no single gene target was found to be 100% accurate. A group of omp2 negative NTHi were observed to be phylogenetically divergent from H. haemolyticus and remaining NTHi. The presence of an atypical group from a geographically and disease limited set of isolates supports the theory that the heterogeneity of NTHi may provide a genetic continuum between NTHi and H. haemolyticus.


Subject(s)
Haemophilus Infections/genetics , Haemophilus influenzae/genetics , Phylogeny , Pulmonary Disease, Chronic Obstructive/genetics , Adult , Aged , Aged, 80 and over , Female , Haemophilus Infections/blood , Haemophilus Infections/microbiology , Haemophilus Infections/pathology , Haemophilus influenzae/classification , Haemophilus influenzae/pathogenicity , Humans , Male , Middle Aged , Phosphotransferases/genetics , Polymerase Chain Reaction , Pulmonary Disease, Chronic Obstructive/blood , Pulmonary Disease, Chronic Obstructive/microbiology , Pulmonary Disease, Chronic Obstructive/pathology
15.
Int J Pediatr Otorhinolaryngol ; 112: 61-66, 2018 Sep.
Article in English | MEDLINE | ID: mdl-30055742

ABSTRACT

The objective of this study was to investigate the expression and the role of surfactant protein A (SP-A) in the middle ear (ME) mucosa in response to bacterial infection in a rat model. Otitis media (OM) was induced by surgical inoculation of non-typeable Haemophilus influenza (NTHi) into the ME cavity of Sprague-Dawley rats. The rats were divided into an NTHi-induced OM group and a phosphate-buffered saline-injected control group. The NTHi-induced OM and control groups were subdivided into sets of 6 rats, one for each of the 6 time points (0, 1, 2, 4, 7, and 14 days post-inoculation), at which point the rats were euthanized after inoculation. The concentrations of SP-A in the ME effusion were determined by an enzyme-linked immunosorbent assay (ELISA). Tissue expression of SP-A, interleukin-1ß (IL-1ß), interleukin-6 (IL-6), and tumor necrosis factor-α (TNF-α) in infected ME mucosa was assessed by immunohistochemical staining. For mRNA expression quantification, RNA was extracted from the ME mucosa and SP-A expression was monitored and compared between the control and OM groups using quantitative polymerase chain reaction (PCR). Expression of IL-1ß, IL-6, and TNF-α in the ME mucosa was also evaluated. SP-A expression was evaluated in the effusion of pediatric OM patients (70 ears) who received ventilation-tube insertion by ELISA. SP-A was detected in normal rat ME mucosa before bacterial inoculation. SP-A expression was up-regulated in the NTHi-induced OM group (p = 0.046). Immunohistochemical staining revealed increased SP-A expression on post-inoculation day 1, 2, and 4 in the OM group. Expression of proinflammatory cytokines (IL-1ß, IL-6, and TNF-α) in the ME also increased significantly on post-inoculation day 1, 2, and 4 in the OM group. It correlated with changes in SP-A expression. Expression of SP-A was also identified in the ME effusion of humans. SP-A exists in the ME of the rat and was up-regulated in the ME of NTHi-induced OM. Expression of IL-1ß, IL-6, and TNF-α was increased in the ME of the bacteria-induced OM in the rat model. The results suggest that SP-A may play a significant role in the early phase of OM induction and subsequent recovery from it.


Subject(s)
Haemophilus Infections/genetics , Interleukin-1beta/genetics , Interleukin-6/genetics , Mucous Membrane/metabolism , Otitis Media with Effusion/genetics , Pulmonary Surfactant-Associated Protein A/genetics , RNA, Messenger/metabolism , Tumor Necrosis Factor-alpha/genetics , Animals , Child, Preschool , Cytokines/genetics , Cytokines/metabolism , Disease Models, Animal , Ear, Middle , Enzyme-Linked Immunosorbent Assay , Female , Haemophilus Infections/metabolism , Haemophilus influenzae , Humans , Interleukin-1beta/metabolism , Interleukin-6/metabolism , Male , Middle Ear Ventilation , Otitis Media/genetics , Otitis Media/metabolism , Otitis Media with Effusion/metabolism , Otitis Media with Effusion/surgery , Polymerase Chain Reaction , Pulmonary Surfactant-Associated Protein A/metabolism , Rats , Rats, Sprague-Dawley , Surface-Active Agents , Tumor Necrosis Factor-alpha/metabolism , Up-Regulation
16.
Int J Mol Sci ; 19(5)2018 Apr 29.
Article in English | MEDLINE | ID: mdl-29710817

ABSTRACT

Haemophilus parasuis is the causative agent of Glässer’s disease in pigs. H. parasuis can cause vascular damage, although the mechanism remains unclear. In this study, we investigated the host cell responses involved in the molecular pathway interactions in porcine aortic vascular endothelial cells (PAVECs) induced by H. parasuis using RNA-Seq. The transcriptome results showed that when PAVECs were infected with H. parasuis for 24 h, 281 differentially expressed genes (DEGs) were identified; of which, 236 were upregulated and 45 downregulated. The 281 DEGs were involved in 136 KEGG signaling pathways that were organismal systems, environmental information processing, metabolism, cellular processes, and genetic information processing. The main pathways were the Rap1, FoxO, and PI3K/Akt signaling pathways, and the overexpressed genes were determined and verified by quantitative reverse transcription polymerase chain reaction. In addition, 252 genes were clustered into biological processes, molecular processes, and cellular components. Our study provides new insights for understanding the interaction between bacterial and host cells, and analyzed, in detail, the possible mechanisms that lead to vascular damage induced by H. parasuis. This may lead to development of novel therapeutic targets to control H. parasuis infection.


Subject(s)
Endothelial Cells/metabolism , Haemophilus Infections/genetics , Transcriptome , Animals , Cells, Cultured , Endothelial Cells/microbiology , Endothelium, Vascular/cytology , Forkhead Transcription Factors/genetics , Forkhead Transcription Factors/metabolism , Haemophilus Infections/metabolism , Haemophilus parasuis/pathogenicity , Phosphatidylinositol 3-Kinases/genetics , Phosphatidylinositol 3-Kinases/metabolism , Proto-Oncogene Proteins c-akt/genetics , Proto-Oncogene Proteins c-akt/metabolism , Swine
17.
Infect Immun ; 85(11)2017 11.
Article in English | MEDLINE | ID: mdl-28847849

ABSTRACT

We previously found CC chemokine ligand 3 (CCL3) to be a potent effector of inflammation during otitis media (OM): exogenous CCL3 rescues the OM phenotype of tumor necrosis factor-deficient mice and the function of macrophages deficient in several innate immune molecules. To further delineate the role of CCL3 in OM, we evaluated middle ear (ME) responses of ccl3-/-mice to nontypeable Haemophilus influenzae (NTHi). CCL chemokine gene expression was evaluated in wild-type (WT) mice during the complete course of acute OM. OM was induced in ccl3-/- and WT mice, and infection and inflammation were monitored for 21 days. Phagocytosis and killing of NTHi by macrophages were evaluated by an in vitro assay. The nasopharyngeal bacterial load was assessed in naive animals of both strains. Many CCL genes showed increased expression levels during acute OM, with CCL3 being the most upregulated, at levels 600-fold higher than the baseline. ccl3-/- deletion compromised ME bacterial clearance and prolonged mucosal hyperplasia. ME recruitment of leukocytes was delayed but persisted far longer than in WT mice. These events were linked to a decrease in the macrophage capacity for NTHi phagocytosis and increased nasopharyngeal bacterial loads in ccl3-/- mice. The generalized impairment in inflammatory cell recruitment was associated with compensatory changes in the expression profiles of CCL2, CCL7, and CCL12. CCL3 plays a significant role in the clearance of infection and resolution of inflammation and contributes to mucosal host defense of the nasopharyngeal niche, a reservoir for ME and upper respiratory infections. Therapies based on CCL3 could prove useful in treating or preventing persistent disease.


Subject(s)
Chemokine CCL3/immunology , Ear, Middle/immunology , Haemophilus Infections/immunology , Haemophilus influenzae/immunology , Nasopharynx/immunology , Otitis Media/immunology , Animals , Bacterial Load , Cell Movement , Chemokine CCL2/genetics , Chemokine CCL2/immunology , Chemokine CCL3/deficiency , Chemokine CCL3/genetics , Chemokine CCL7/genetics , Chemokine CCL7/immunology , Disease Models, Animal , Ear, Middle/microbiology , Gene Expression Regulation , Haemophilus Infections/genetics , Haemophilus Infections/microbiology , Haemophilus Infections/pathology , Host-Pathogen Interactions , Leukocytes/immunology , Leukocytes/microbiology , Macrophages/immunology , Macrophages/microbiology , Mice , Mice, Knockout , Monocyte Chemoattractant Proteins/genetics , Monocyte Chemoattractant Proteins/immunology , Nasopharynx/microbiology , Otitis Media/genetics , Otitis Media/microbiology , Otitis Media/pathology , Phagocytosis , Signal Transduction
18.
PLoS One ; 12(5): e0178115, 2017.
Article in English | MEDLINE | ID: mdl-28542534

ABSTRACT

The aim of the present study was to estimate the relative contribution of immunogenetic and microbiological factors in the development of recurrent tonsillitis in a Mexican population. Patients (n = 138) with recurrent tonsillitis and an indication of tonsillectomy (mean age: 6.05 years ± 3.00; median age: 5 years, female: 58; age range: 1-15 years) and 195 non-related controls older than 18 years and a medical history free of recurrent tonsillitis were included. To evaluate the microbial contribution, tonsil swab samples from both groups and extracted tonsil samples from cases were cultured. Biofilm production of isolated bacteria was measured. To assess the immunogenetic component, DNA from peripheral blood was genotyped for the TNFA-308G/A single-nucleotide polymorphism (SNP) and for the IL1B -31C/T SNP. Normal microbiota, but no pathogens or potential pathogens, were identified from all control sample cultures. The most frequent pathogenic species detected in tonsils from cases were Staphylococcus aureus (48.6%, 67/138) and Haemophilus influenzae (31.9%, 44/138), which were found more frequently in patient samples than in samples from healthy volunteers (P < 0.0001). Importantly, 41/54 (75.9%) S. aureus isolates were biofilm producers (18 weak and 23 strong), whereas 17/25 (68%) H. influenzae isolates were biofilm producers (10 weak, and 7 strong biofilm producers). Patients with at least one copy of the IL1B-31*C allele had a higher risk of recurrent tonsillitis (OR = 4.03; 95% CI = 1.27-14.27; P = 0.013). TNFA-308 G/A alleles were not preferentially distributed among the groups. When considering the presence of IL1B-31*C plus S. aureus, IL1B-31*C plus S. aureus biofilm producer, IL1B-31*C plus H. influenzae or IL1B-31*C plus H. influenzae biofilm producer, the OR tended to infinite. Thus, the presence of IL1B-31*C allele plus the presence of S. aureus and/or H. influenzae could be related to the development of tonsillitis in this particular Mexican population.


Subject(s)
Carrier State/microbiology , Haemophilus Infections/etiology , Interleukin-1beta/genetics , Staphylococcal Infections/etiology , Tonsillitis/etiology , Adolescent , Adult , Aged , Alleles , Biofilms , Carrier State/immunology , Case-Control Studies , Child , Child, Preschool , Female , Haemophilus Infections/genetics , Haemophilus Infections/microbiology , Haemophilus influenzae/isolation & purification , Humans , Immunogenetic Phenomena , Infant , Male , Mexico , Microbiota , Middle Aged , Recurrence , Risk Factors , Staphylococcal Infections/genetics , Staphylococcal Infections/microbiology , Staphylococcus aureus/isolation & purification , Tonsillitis/genetics , Tonsillitis/microbiology , Tumor Necrosis Factor-alpha/genetics , Young Adult
19.
Curr Protoc Mouse Biol ; 7(1): 29-46, 2017 Mar 02.
Article in English | MEDLINE | ID: mdl-28252201

ABSTRACT

Acute otitis media, inflammation of the middle ear bulla, is the most common bacterial infection in children. For one of the principal otopathogens, non-typeable Haemophilus influenzae (NTHi), animal models allow us to investigate host-microbial interactions relevant to the onset and progression of infection and to study treatment of middle ear disease. We have established a robust model of NTHi middle ear infection in the Junbo mouse. Intranasal inoculation with NTHi produces high rates of bulla infection and high bacterial titers in bulla fluids; bacteria can also spread down the respiratory tract to the mouse lung. An innate immune response is detected in the bulla of Junbo mice following NTHi infection, and bacteria are maintained in some ears at least up to day 56 post-inoculation. The Junbo/NTHi infection model facilitates studies on bacterial pathogenesis and antimicrobial intervention regimens and vaccines for better treatment and prevention of NTHi middle ear infection. © 2017 by John Wiley & Sons, Inc.


Subject(s)
Disease Models, Animal , Ear, Middle/microbiology , Haemophilus Infections/microbiology , Haemophilus influenzae/physiology , Otitis Media/microbiology , Animals , DNA-Binding Proteins/genetics , Ear, Middle/metabolism , Ear, Middle/pathology , Haemophilus Infections/genetics , Host-Pathogen Interactions , Humans , MDS1 and EVI1 Complex Locus Protein , Mice, Mutant Strains , Mutation, Missense , Otitis Media/genetics , Proto-Oncogenes/genetics , Pulmonary Infarction/genetics , Pulmonary Infarction/microbiology , Transcription Factors/genetics
20.
Sci Rep ; 7: 43426, 2017 03 06.
Article in English | MEDLINE | ID: mdl-28262704

ABSTRACT

Here we investigated the relationship between local bacterial colonization and anti-bacterial immune responses in pre-school asthmatic and control children within the EU-wide study PreDicta. In this cohort of pre-school asthmatic children, nasopharyngeal colonization with Gram-negative bacteria such as Haemophilus influenzae and Moraxella catarrhalis was found to be associated with the highest interferon beta (IFNß) and IL-33 levels in the nasal pharyngeal fluids (NPF). IL33R-ST2 was found induced in the blood of asthmatic children with additional Gram + bacteria in the nasopharynx (Gr+/-). Furthermore, asthmatic children had more episodes of infection that required antibiotic therapy than the control group. Treatment with antibiotics associated with reduced ST2 in blood cells of both asthmatic and control children and reduced IL-33 levels in the airways of asthmatic children. In the absence of Staphylococcus (S.) aureus in NPF, antibiotic therapy associated with decreased IL-33 levels in the NPF and lower ST2 values in the blood of control children but not of asthmatic children. These data suggest that, in asthmatic children, Gram- bacteria, which persist after antibiotic therapy, contributes to IL-33 locally and associated with Gr + bacteria colonization in the airways, inhibited IFN-ß and in the absence of Staphylococcus (S.) aureus, induced ST2 bearing cells in their blood.


Subject(s)
Asthma/immunology , Haemophilus Infections/immunology , Interleukin-1 Receptor-Like 1 Protein/immunology , Interleukin-33/immunology , Moraxellaceae Infections/immunology , Staphylococcal Infections/immunology , Anti-Bacterial Agents/therapeutic use , Asthma/drug therapy , Asthma/genetics , Asthma/microbiology , Bronchodilator Agents/therapeutic use , Case-Control Studies , Child , Child, Preschool , Female , Fluticasone/therapeutic use , Gene Expression Regulation , Haemophilus Infections/drug therapy , Haemophilus Infections/genetics , Haemophilus Infections/microbiology , Haemophilus influenzae/drug effects , Haemophilus influenzae/growth & development , Haemophilus influenzae/immunology , Humans , Interferon-beta/genetics , Interferon-beta/immunology , Interleukin-1 Receptor-Like 1 Protein/genetics , Interleukin-33/genetics , Male , Moraxella catarrhalis/drug effects , Moraxella catarrhalis/growth & development , Moraxella catarrhalis/immunology , Moraxellaceae Infections/drug therapy , Moraxellaceae Infections/genetics , Moraxellaceae Infections/microbiology , Nasopharynx/drug effects , Nasopharynx/growth & development , Nasopharynx/immunology , Respiratory Function Tests , Salmeterol Xinafoate/therapeutic use , Staphylococcal Infections/drug therapy , Staphylococcal Infections/genetics , Staphylococcal Infections/microbiology , Staphylococcus aureus/drug effects , Staphylococcus aureus/growth & development , Staphylococcus aureus/immunology
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